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en:uncordi [2018/04/16 08:05]
David Zelený
en:uncordi [2019/01/21 00:47] (current)
David Zelený
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-====== ​Unconstrained ​ordination ​====== +====== ​Vegan unconstrained ​ordination functions (Shiny app) ======
-===== Overview of functions ​in vegan (Shiny app) =====+
 I developed a simple [[https://​zdealveindy.shinyapps.io/​uncordi/​|interactive online tool]] visualizing the use of all unconstrained ordination methods in ''​vegan''​ package discussed on this website, using a set of example datasets ([[http://​davidzeleny.net/​blog/​2018/​04/​01/​unconstrained-ordinations-in-vegan-an-online-tool/​|why?​]]). Scroll down for a short manual [[en:​uncordi#​how_to_use_the_app|how to use the app]]. I developed a simple [[https://​zdealveindy.shinyapps.io/​uncordi/​|interactive online tool]] visualizing the use of all unconstrained ordination methods in ''​vegan''​ package discussed on this website, using a set of example datasets ([[http://​davidzeleny.net/​blog/​2018/​04/​01/​unconstrained-ordinations-in-vegan-an-online-tool/​|why?​]]). Scroll down for a short manual [[en:​uncordi#​how_to_use_the_app|how to use the app]].
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 ==== Known bugs ==== ==== Known bugs ====
-  * If I copy the script and use it in R, all environmental variables from .env file are loaded, while the Shiny does internal selection of only a small subset. This can be fixed by either adding only selection of env. vars into the original files, or by adding the line of script with selection of variables ​(first perhaps preferred, ​but need to change the name of the file, since the same files are used across the anadat-r website ​for examples and exercises)+  * None reported right now (but there will be some for sure)
en/uncordi.1523837123.txt.gz · Last modified: 2018/04/16 08:05 by David Zelený